IL_9MNC_016

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GCUCC*GCCC

Length

9 nucleotides

Bulged bases

9MNC|1|L5|C|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|G|169
9MNC|1|L5|C|170
9MNC|1|L5|U|171
9MNC|1|L5|C|172
9MNC|1|L5|C|173
*
9MNC|1|L5|G|263
9MNC|1|L5|C|264
9MNC|1|L5|C|265
9MNC|1|L5|C|266

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LO

Large ribosomal subunit protein uL29

Chain LQ

Large ribosomal subunit protein eL13