IL_9MNC_041

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGAC*GGUCG

Length

9 nucleotides

Bulged bases

9MNC|1|L5|C|1202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|1093
9MNC|1|L5|G|1094
9MNC|1|L5|A|1095
9MNC|1|L5|C|1096
*
9MNC|1|L5|G|1199
9MNC|1|L5|G|1200
9MNC|1|L5|U|1201
9MNC|1|L5|C|1202
9MNC|1|L5|G|1203

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LS

Large ribosomal subunit protein eL20

Chain LT

Large ribosomal subunit protein eL21