IL_9MNC_044

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

9MNC|1|L5|G|1359, 9MNC|1|L5|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|1357
9MNC|1|L5|G|1358
9MNC|1|L5|G|1359
9MNC|1|L5|G|1360
9MNC|1|L5|G|1361
*
9MNC|1|L5|C|1376
9MNC|1|L5|G|1377
9MNC|1|L5|C|1378
9MNC|1|L5|C|1379
9MNC|1|L5|G|1380
9MNC|1|L5|U|1381
9MNC|1|L5|G|1382

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LN

Large ribosomal subunit protein eL15

Chain LQ

Large ribosomal subunit protein eL13

Chain La

Large ribosomal subunit protein uL15