3D structure

PDB id
9MNC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 80S ribosome bound to small molecule SW393071
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
UUU*A(PSU)A
Length
6 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MNC|1|L5|U|1671
9MNC|1|L5|U|1672
9MNC|1|L5|U|1673
*
9MNC|1|L5|A|1682
9MNC|1|L5|PSU|1683
9MNC|1|L5|A|1684

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LQ
Large ribosomal subunit protein eL13
Chain LT
Large ribosomal subunit protein eL21
Chain La
Large ribosomal subunit protein uL15
Chain Lb
Large ribosomal subunit protein eL29
Chain Lj
Large ribosomal subunit protein eL18

Coloring options:

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