IL_9MNC_083

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

9MNC|1|L5|U|2305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|2302
9MNC|1|L5|C|2303
9MNC|1|L5|U|2304
9MNC|1|L5|U|2305
9MNC|1|L5|G|2306
9MNC|1|L5|A|2307
9MNC|1|L5|A|2308
9MNC|1|L5|G|2309
*
9MNC|1|L5|U|2329
9MNC|1|L5|G|2330
9MNC|1|L5|G|2331
9MNC|1|L5|A|2332
9MNC|1|L5|G|2333

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L1

5.8S ribosomal RNA; 5.8S rRNA

Chain LC

Large ribosomal subunit protein uL4

Chain LE

Large ribosomal subunit protein uL24

Chain LI

Large ribosomal subunit protein eL32