IL_9MNC_209
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CC*GCCG
- Length
- 6 nucleotides
- Bulged bases
- 9MNC|1|S2|C|839, 9MNC|1|S2|C|840
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MNC_209 not in the Motif Atlas
- Geometric match to IL_9E6Q_090
- Geometric discrepancy: 0.2176
- The information below is about IL_9E6Q_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
9MNC|1|S2|C|833
9MNC|1|S2|C|834
*
9MNC|1|S2|G|838
9MNC|1|S2|C|839
9MNC|1|S2|C|840
9MNC|1|S2|G|841
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SY
- Isoform 3 of Small ribosomal subunit protein eS24
Coloring options: