3D structure

PDB id
9MNC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 80S ribosome bound to small molecule SW393071
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
CGGAU*AGAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MNC|1|S2|C|1742
9MNC|1|S2|G|1743
9MNC|1|S2|G|1744
9MNC|1|S2|A|1745
9MNC|1|S2|U|1746
*
9MNC|1|S2|A|1788
9MNC|1|S2|G|1789
9MNC|1|S2|A|1790
9MNC|1|S2|A|1791
9MNC|1|S2|G|1792

Current chains

Chain S2
18S rRNA

Nearby chains

Chain LW
Large ribosomal subunit protein eL24
Chain SG
Small ribosomal subunit protein eS6
Chain SI
Small ribosomal subunit protein eS8

Coloring options:

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