IL_9MOR_014

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UUAAC*GGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MOR_014 not in the Motif Atlas

Homologous match to IL_9DFE_014

Geometric discrepancy: 0.3998

The information below is about IL_9DFE_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66798.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

9MOR|1|1|U|606
9MOR|1|1|U|607
9MOR|1|1|A|608
9MOR|1|1|A|609
9MOR|1|1|C|610
*
9MOR|1|1|G|618
9MOR|1|1|G|619
9MOR|1|1|G|620
9MOR|1|1|A|621
9MOR|1|1|G|622

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

Large ribosomal subunit protein uL4

Chain L

Large ribosomal subunit protein uL15