3D structure

PDB id
9MOR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GGGAAAC*GGAAGAUGUAACGGGGC
Length
24 nucleotides
Bulged bases
9MOR|1|1|A|1127, 9MOR|1|1|U|1130, 9MOR|1|1|A|1133
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MOR|1|1|G|1024
9MOR|1|1|G|1025
9MOR|1|1|G|1026
9MOR|1|1|A|1027
9MOR|1|1|A|1028
9MOR|1|1|A|1029
9MOR|1|1|C|1030
*
9MOR|1|1|G|1124
9MOR|1|1|G|1125
9MOR|1|1|A|1126
9MOR|1|1|A|1127
9MOR|1|1|G|1128
9MOR|1|1|A|1129
9MOR|1|1|U|1130
9MOR|1|1|G|1131
9MOR|1|1|U|1132
9MOR|1|1|A|1133
9MOR|1|1|A|1134
9MOR|1|1|C|1135
9MOR|1|1|G|1136
9MOR|1|1|G|1137
9MOR|1|1|G|1138
9MOR|1|1|G|1139
9MOR|1|1|C|1140

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain C
50S ribosomal protein L3
Chain J
Large ribosomal subunit protein uL13
Chain M
50S ribosomal protein L16
Chain f
50S ribosomal protein L36

Coloring options:

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