IL_9MOR_146

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGGG*UUG

Length

7 nucleotides

Bulged bases

9MOR|1|2|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MOR_146 not in the Motif Atlas

Geometric match to IL_1MFQ_003

Geometric discrepancy: 0.3845

The information below is about IL_1MFQ_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

9MOR|1|2|C|924
9MOR|1|2|G|925
9MOR|1|2|G|926
9MOR|1|2|G|927
*
9MOR|1|2|U|1390
9MOR|1|2|U|1391
9MOR|1|2|G|1392

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 7

mRNA

Chain j

30S ribosomal protein S5