IL_9MQ4_091

3D structure

PDB id

9MQ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

9MQ4|1|1|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MQ4_091 not in the Motif Atlas

Geometric match to IL_9AXU_122

Geometric discrepancy: 0.3767

The information below is about IL_9AXU_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

9MQ4|1|1|U|2401
9MQ4|1|1|U|2402
9MQ4|1|1|C|2403
*
9MQ4|1|1|G|2414
9MQ4|1|1|G|2415

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15

Chain c

50S ribosomal protein L33

Chain e

50S ribosomal protein L35