IL_9MR4_047

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GG*CGCC

Length

6 nucleotides

Bulged bases

9MR4|1|5|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MR4_047 not in the Motif Atlas

Homologous match to IL_8GLP_050

Geometric discrepancy: 0.2042

The information below is about IL_8GLP_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73464.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

9MR4|1|5|G|1360
9MR4|1|5|G|1361
*
9MR4|1|5|C|1376
9MR4|1|5|G|1377
9MR4|1|5|C|1378
9MR4|1|5|C|1379

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain L

Large ribosomal subunit protein eL13

Chain N

Ribosomal protein L15

Chain a

60S ribosomal protein L27a