IL_9MTP_084

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

9MTP|1|1A|C|2164, 9MTP|1|1A|U|2167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|1A|G|2124
9MTP|1|1A|G|2125
9MTP|1|1A|A|2126
9MTP|1|1A|G|2127
*
9MTP|1|1A|C|2161
9MTP|1|1A|G|2162
9MTP|1|1A|C|2163
9MTP|1|1A|C|2164
9MTP|1|1A|G|2165
9MTP|1|1A|G|2166
9MTP|1|1A|U|2167
9MTP|1|1A|G|2168
9MTP|1|1A|A|2169
9MTP|1|1A|A|2170
9MTP|1|1A|A|2171
9MTP|1|1A|U|2172
9MTP|1|1A|A|2173
9MTP|1|1A|C|2174

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains