IL_9MTQ_063

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CAA*UCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTQ_063 not in the Motif Atlas

Geometric match to IL_9DFE_064

Geometric discrepancy: 0.0599

The information below is about IL_9DFE_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

9MTQ|1|1A|C|1663
9MTQ|1|1A|A|1664
9MTQ|1|1A|A|1665
*
9MTQ|1|1A|U|1995
9MTQ|1|1A|C|1996
9MTQ|1|1A|G|1997

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1E

50S ribosomal protein L3

Chain 1O

50S ribosomal protein L14

Chain 1T

50S ribosomal protein L19