IL_9MTQ_100
3D structure
- PDB id
- 9MTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTQ_100 not in the Motif Atlas
- Geometric match to IL_9DFE_102
- Geometric discrepancy: 0.0422
- The information below is about IL_9DFE_102
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9MTQ|1|1A|C|2652
9MTQ|1|1A|U|2653
9MTQ|1|1A|A|2654
9MTQ|1|1A|G|2655
9MTQ|1|1A|U|2656
9MTQ|1|1A|A|2657
9MTQ|1|1A|C|2658
*
9MTQ|1|1A|G|2663
9MTQ|1|1A|G|2664
9MTQ|1|1A|A|2665
9MTQ|1|1A|C|2666
9MTQ|1|1A|C|2667
9MTQ|1|1A|G|2668
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1H
- 50S ribosomal protein L6
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