IL_9MTQ_170
3D structure
- PDB id
- 9MTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTQ_170 not in the Motif Atlas
- Geometric match to IL_4LFB_062
- Geometric discrepancy: 0.1007
- The information below is about IL_4LFB_062
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.7
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9MTQ|1|1a|C|1431
9MTQ|1|1a|G|1432
9MTQ|1|1a|A|1433
9MTQ|1|1a|A|1434
9MTQ|1|1a|G|1435
*
9MTQ|1|1a|C|1466
9MTQ|1|1a|G|1467
9MTQ|1|1a|A|1468
9MTQ|1|1a|G|1469
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1T
- 50S ribosomal protein L19
- Chain 1t
- 30S ribosomal protein S20
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