IL_9MTQ_230

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

9MTQ|1|2A|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTQ_230 not in the Motif Atlas

Geometric match to IL_9DFE_060

Geometric discrepancy: 0.2577

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

9MTQ|1|2A|U|1481
9MTQ|1|2A|G|1482
*
9MTQ|1|2A|C|1506
9MTQ|1|2A|A|1507
9MTQ|1|2A|A|1508
9MTQ|1|2A|C|1509
9MTQ|1|2A|A|1509|||A
9MTQ|1|2A|A|1509|||B
9MTQ|1|2A|G|1510

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains