IL_9MTQ_278

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGGG*CCGAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTQ_278 not in the Motif Atlas

Geometric match to IL_9DFE_108

Geometric discrepancy: 0.0626

The information below is about IL_9DFE_108

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75294.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

9MTQ|1|2A|G|2843
9MTQ|1|2A|G|2844
9MTQ|1|2A|G|2845
9MTQ|1|2A|G|2846
*
9MTQ|1|2A|C|2870
9MTQ|1|2A|C|2871
9MTQ|1|2A|G|2872
9MTQ|1|2A|A|2873
9MTQ|1|2A|C|2874

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2E

50S ribosomal protein L3

Chain 2R

50S ribosomal protein L17

Chain 2T

50S ribosomal protein L19