IL_9MTS_097

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

9MTS|1|1A|A|2572, 9MTS|1|1A|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTS_097 not in the Motif Atlas

Geometric match to IL_9DFE_098

Geometric discrepancy: 0.0618

The information below is about IL_9DFE_098

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

9MTS|1|1A|C|2512
9MTS|1|1A|G|2513
*
9MTS|1|1A|C|2571
9MTS|1|1A|A|2572
9MTS|1|1A|C|2573
9MTS|1|1A|G|2574

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1E

50S ribosomal protein L3

Chain 1N

50S ribosomal protein L13

Chain 1w

Peptide chain release factor 1