IL_9MTS_149

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

9MTS|1|1a|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTS_149 not in the Motif Atlas

Geometric match to IL_4LFB_036

Geometric discrepancy: 0.0772

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

9MTS|1|1a|G|925
9MTS|1|1a|G|926
9MTS|1|1a|G|927
*
9MTS|1|1a|U|1390
9MTS|1|1a|U|1391

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1v

CYS-Stop mRNA