3D structure

PDB id
9MTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
UUAAG*CGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9MTS_188 not in the Motif Atlas
Geometric match to IL_9DFE_014
Geometric discrepancy: 0.0659
The information below is about IL_9DFE_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_66798.2
Basepair signature
cWW-L-R-L-R-tHS-cWW
Number of instances in this motif group
6

Unit IDs

9MTS|1|2A|U|606
9MTS|1|2A|U|607
9MTS|1|2A|A|608
9MTS|1|2A|A|609
9MTS|1|2A|G|610
*
9MTS|1|2A|C|618
9MTS|1|2A|G|619
9MTS|1|2A|G|620
9MTS|1|2A|A|621
9MTS|1|2A|G|622

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 2F
50S ribosomal protein L4
Chain 2P
50S ribosomal protein L15

Coloring options:


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