IL_9MTS_277

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

9MTS|1|2A|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTS_277 not in the Motif Atlas

Geometric match to IL_9DFE_106

Geometric discrepancy: 0.07

The information below is about IL_9DFE_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

9MTS|1|2A|G|2737
9MTS|1|2A|A|2738
9MTS|1|2A|U|2739
9MTS|1|2A|A|2740
9MTS|1|2A|A|2741
9MTS|1|2A|C|2742
*
9MTS|1|2A|G|2762
9MTS|1|2A|G|2763
9MTS|1|2A|A|2764
9MTS|1|2A|A|2765
9MTS|1|2A|G|2766
9MTS|1|2A|C|2767

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L36

Chain 2H

50S ribosomal protein L6

Chain 2N

50S ribosomal protein L13