IL_9MTS_340
3D structure
- PDB id
- 9MTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- (5MC)AC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 9MTS|1|2a|A|1492, 9MTS|1|2a|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MTS_340 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.1964
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9MTS|1|2a|5MC|1407
9MTS|1|2a|A|1408
9MTS|1|2a|C|1409
*
9MTS|1|2a|G|1491
9MTS|1|2a|A|1492
9MTS|1|2a|A|1493
9MTS|1|2a|G|1494
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2l
- 30S ribosomal protein S12
- Chain 2v
- CYS-Stop mRNA
- Chain 2w
- Peptide chain release factor 1
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