IL_9MTY_001
3D structure
- PDB id
- 9MTY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of TIGR-TasR in complex with tigRNA and target DNA after DNA cleavage
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CCAUGCAAGCCCUG*CCAUUGCCUUAGUG
- Length
- 28 nucleotides
- Bulged bases
- 9MTY|1|C|A|5, 9MTY|1|C|U|15, 9MTY|1|C|A|23, 9MTY|1|C|U|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MTY|1|C|C|3
9MTY|1|C|C|4
9MTY|1|C|A|5
9MTY|1|C|U|6
9MTY|1|C|G|7
9MTY|1|C|C|8
9MTY|1|C|A|9
9MTY|1|C|A|10
9MTY|1|C|G|11
9MTY|1|C|C|12
9MTY|1|C|C|13
9MTY|1|C|C|14
9MTY|1|C|U|15
9MTY|1|C|G|16
*
9MTY|1|C|C|21
9MTY|1|C|C|22
9MTY|1|C|A|23
9MTY|1|C|U|24
9MTY|1|C|U|25
9MTY|1|C|G|26
9MTY|1|C|C|27
9MTY|1|C|C|28
9MTY|1|C|U|29
9MTY|1|C|U|30
9MTY|1|C|A|31
9MTY|1|C|G|32
9MTY|1|C|U|33
9MTY|1|C|G|34
Current chains
- Chain C
- tigRNA
Nearby chains
- Chain A
- Transposase IS116/IS110/IS902 C-terminal domain-containing protein
- Chain B
- Transposase IS116/IS110/IS902 C-terminal domain-containing protein
- Chain D
- Target DNA, spacer A targeted strand, 5' of cut
- Chain E
- Target DNA, spacer B targeted strand, 5' of cut
- Chain F
- Target DNA, spacer A targeted strand, 3' of cut
- Chain G
- Target DNA, spacer B targeted strand, 3' of cut
Coloring options: