IL_9N2B_070
3D structure
- PDB id
- 9N2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 9N2B|1|23|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2B_070 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.2033
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9N2B|1|23|G|81
9N2B|1|23|U|82
9N2B|1|23|A|83
9N2B|1|23|A|84
9N2B|1|23|G|85
*
9N2B|1|23|C|97
9N2B|1|23|G|98
9N2B|1|23|U|99
9N2B|1|23|U|100
9N2B|1|23|A|101
9N2B|1|23|U|102
9N2B|1|23|A|103
9N2B|1|23|A|104
9N2B|1|23|C|105
Current chains
- Chain 23
- 23S ribosomal RNA (rRNA) from the rrnB operon
Nearby chains
- Chain LX
- 50S ribosomal protein L24
- Chain Lc
- 50S ribosomal protein L29
Coloring options: