IL_9N2B_169
3D structure
- PDB id
- 9N2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUGAAG*CGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2B_169 not in the Motif Atlas
- Homologous match to IL_5J7L_351
- Geometric discrepancy: 0.092
- The information below is about IL_5J7L_351
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29471.1
- Basepair signature
- cWW-cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
9N2B|1|23|C|2806
9N2B|1|23|U|2807
9N2B|1|23|G|2808
9N2B|1|23|A|2809
9N2B|1|23|A|2810
9N2B|1|23|G|2811
*
9N2B|1|23|C|2889
9N2B|1|23|G|2890
9N2B|1|23|U|2891
9N2B|1|23|G|2892
Current chains
- Chain 23
- 23S ribosomal RNA (rRNA) from the rrnB operon
Nearby chains
- Chain LC
- 50S ribosomal protein L3
- Chain LV
- Large ribosomal subunit protein uL22
- Chain Lf
- 50S ribosomal protein L32
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