IL_9N2C_053
3D structure
- PDB id
- 9N2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N2C_053 not in the Motif Atlas
- Geometric match to IL_5J7L_053
- Geometric discrepancy: 0.1031
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9N2C|1|16|C|1158
9N2C|1|16|U|1159
9N2C|1|16|G|1160
9N2C|1|16|C|1161
*
9N2C|1|16|G|1175
9N2C|1|16|A|1176
9N2C|1|16|G|1177
9N2C|1|16|G|1178
9N2C|1|16|A|1179
9N2C|1|16|A|1180
9N2C|1|16|G|1181
Current chains
- Chain 16
- 16S ribosomal RNA (rRNA) from the rrnH operon
Nearby chains
- Chain SB
- 30S ribosomal protein S2
- Chain SI
- 30S ribosomal protein S9
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