IL_9N6W_028

3D structure

PDB id

9N6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State A*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

AG*UUU

Length

5 nucleotides

Bulged bases

9N6W|1|L0|U|525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6W_028 not in the Motif Atlas

Geometric match to IL_8OI5_131

Geometric discrepancy: 0.2432

The information below is about IL_8OI5_131

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

9N6W|1|L0|A|510
9N6W|1|L0|G|511
*
9N6W|1|L0|U|524
9N6W|1|L0|U|525
9N6W|1|L0|U|526

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LU

Protein SOF1

Chain SA

Nucleolar protein 56

Chain SS

U3 small nucleolar RNA-associated protein 14