IL_9N6X_009

3D structure

PDB id

9N6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.71 Å

Loop

Sequence

AAU*AGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6X_009 not in the Motif Atlas

Geometric match to IL_8OI5_070

Geometric discrepancy: 0.1599

The information below is about IL_8OI5_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

9N6X|1|L0|A|187
9N6X|1|L0|A|188
9N6X|1|L0|U|189
*
9N6X|1|L0|A|208
9N6X|1|L0|G|209
9N6X|1|L0|U|210

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain ND

Bud site selection protein 21

Chain SY

U3 small nucleolar RNA-associated protein 11