IL_9N6X_021

3D structure

PDB id

9N6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.71 Å

Loop

Sequence

CG*CUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6X_021 not in the Motif Atlas

Geometric match to IL_8OI5_072

Geometric discrepancy: 0.1942

The information below is about IL_8OI5_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

9N6X|1|L0|C|413
9N6X|1|L0|G|414
*
9N6X|1|L0|C|441
9N6X|1|L0|U|442
9N6X|1|L0|G|443

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain SI

Ribosome biogenesis protein BMS1

Chain SQ

rRNA-processing protein FCF2

Chain SV

Regulator of rDNA transcription protein 14