IL_9N6Y_001

3D structure

PDB id

9N6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

AG*CGU

Length

5 nucleotides

Bulged bases

9N6Y|1|L0|G|63

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6Y_001 not in the Motif Atlas

Geometric match to IL_8P9A_265

Geometric discrepancy: 0.3052

The information below is about IL_8P9A_265

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

9N6Y|1|L0|A|17
9N6Y|1|L0|G|18
*
9N6Y|1|L0|C|62
9N6Y|1|L0|G|63
9N6Y|1|L0|U|64

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LH

NET1-associated nuclear protein 1