IL_9N6Y_004

3D structure

PDB id

9N6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GGAGA*UAUAC

Length

10 nucleotides

Bulged bases

9N6Y|1|L0|A|102, 9N6Y|1|L0|A|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N6Y|1|L0|G|100
9N6Y|1|L0|G|101
9N6Y|1|L0|A|102
9N6Y|1|L0|G|103
9N6Y|1|L0|A|104
*
9N6Y|1|L0|U|140
9N6Y|1|L0|A|141
9N6Y|1|L0|U|142
9N6Y|1|L0|A|143
9N6Y|1|L0|C|144

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain LH

NET1-associated nuclear protein 1

Chain LJ

U3 small nucleolar RNA-associated protein 15

Chain LL

U3 small nucleolar RNA-associated protein 5