IL_9N6Y_011
3D structure
- PDB id
- 9N6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CG*UUG
- Length
- 5 nucleotides
- Bulged bases
- 9N6Y|1|L0|U|267
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N6Y_011 not in the Motif Atlas
- Geometric match to IL_8TQX_001
- Geometric discrepancy: 0.3109
- The information below is about IL_8TQX_001
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
9N6Y|1|L0|C|245
9N6Y|1|L0|G|246
*
9N6Y|1|L0|U|266
9N6Y|1|L0|U|267
9N6Y|1|L0|G|268
Current chains
- Chain L0
- 5'ETS rRNA
Nearby chains
- Chain LC
- 40S ribosomal protein S16-A
- Chain LZ
- U3 small nucleolar ribonucleoprotein protein IMP3
- Chain SI
- Ribosome biogenesis protein BMS1
- Chain SY
- U3 small nucleolar RNA-associated protein 11
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