3D structure

PDB id
9N74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State H
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
ACCA*UCCCU
Length
9 nucleotides
Bulged bases
9N74|1|L1|C|1158, 9N74|1|L1|C|1159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N74|1|L1|A|1157
9N74|1|L1|C|1158
9N74|1|L1|C|1159
9N74|1|L1|A|1160
*
9N74|1|L1|U|1617
9N74|1|L1|C|1618
9N74|1|L1|C|1619
9N74|1|L1|C|1620
9N74|1|L1|U|1621

Current chains

Chain L1
18S rRNA

Nearby chains

Chain L5
40S ribosomal protein S5
Chain LC
40S ribosomal protein S16-A
Chain LG
40S ribosomal protein S28-A
Chain LO
Periodic tryptophan protein 2
Chain LQ
U3 small nucleolar RNA-associated protein 12
Chain SM
U3 small nucleolar ribonucleoprotein protein IMP4
Chain ST
Nucleolar complex protein 14

Coloring options:

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