3D structure

PDB id
9N74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State H
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GAGUCCCAUAAC*GCAGUC
Length
18 nucleotides
Bulged bases
9N74|1|L2|G|87, 9N74|1|L2|C|90, 9N74|1|L2|C|91, 9N74|1|L2|U|93, 9N74|1|L2|U|324
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N74|1|L2|G|85
9N74|1|L2|A|86
9N74|1|L2|G|87
9N74|1|L2|U|88
9N74|1|L2|C|89
9N74|1|L2|C|90
9N74|1|L2|C|91
9N74|1|L2|A|92
9N74|1|L2|U|93
9N74|1|L2|A|94
9N74|1|L2|A|95
9N74|1|L2|C|96
*
9N74|1|L2|G|320
9N74|1|L2|C|321
9N74|1|L2|A|322
9N74|1|L2|G|323
9N74|1|L2|U|324
9N74|1|L2|C|325

Current chains

Chain L2
U3 snoRNA

Nearby chains

Chain SB
Nucleolar protein 58
Chain SC
rRNA 2'-O-methyltransferase fibrillarin
Chain SD
rRNA 2'-O-methyltransferase fibrillarin
Chain SE
13 kDa ribonucleoprotein-associated protein
Chain SI
Ribosome biogenesis protein BMS1
Chain SQ
rRNA-processing protein FCF2
Chain SY
U3 small nucleolar RNA-associated protein 11

Coloring options:

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