IL_9N76_053
3D structure
- PDB id
- 9N76 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State J
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GC*GUC
- Length
- 5 nucleotides
- Bulged bases
- 9N76|1|L2|U|2
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N76_053 not in the Motif Atlas
- Geometric match to IL_9PN5_090
- Geometric discrepancy: 0.2483
- The information below is about IL_9PN5_090
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.8
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 192
Unit IDs
9N76|1|L1|G|1122
9N76|1|L1|C|1123
*
9N76|1|L2|G|1
9N76|1|L2|U|2
9N76|1|L2|C|3
Current chains
- Chain L1
- 18S rRNA
- Chain L2
- U3 snoRNA
Nearby chains
- Chain NL
- Dimethyladenosine transferase
- Chain NS
- Probable ATP-dependent RNA helicase DHR1
- Chain SH
- RNA 3'-terminal phosphate cyclase-like protein
- Chain ST
- Nucleolar complex protein 14
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