IL_9N77_005
3D structure
- PDB id
- 9N77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State K
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.94 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9N77|1|L1|U|66, 9N77|1|L1|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N77_005 not in the Motif Atlas
- Homologous match to IL_9PN5_148
- Geometric discrepancy: 0.1413
- The information below is about IL_9PN5_148
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.4
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9N77|1|L1|U|64
9N77|1|L1|A|65
9N77|1|L1|U|66
9N77|1|L1|A|67
9N77|1|L1|A|68
9N77|1|L1|G|69
*
9N77|1|L1|U|82
9N77|1|L1|G|83
9N77|1|L1|A|84
9N77|1|L1|A|85
9N77|1|L1|A|86
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L6
- 40S ribosomal protein S6-A
- Chain LF
- 40S ribosomal protein S24-A
- Chain SP
- U3 small nucleolar RNA-associated protein 20
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