IL_9N78_031
3D structure
- PDB id
- 9N78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State L
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.17 Å
Loop
- Sequence
- GGCAAGUC*GCAGCCGCGGUAAUUCC
- Length
- 25 nucleotides
- Bulged bases
- 9N78|1|L1|A|556, 9N78|1|L1|C|572, 9N78|1|L1|C|573, 9N78|1|L1|A|579
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9N78|1|L1|G|552
9N78|1|L1|G|553
9N78|1|L1|C|554
9N78|1|L1|A|555
9N78|1|L1|A|556
9N78|1|L1|G|557
9N78|1|L1|U|558
9N78|1|L1|C|559
*
9N78|1|L1|G|568
9N78|1|L1|C|569
9N78|1|L1|A|570
9N78|1|L1|G|571
9N78|1|L1|C|572
9N78|1|L1|C|573
9N78|1|L1|G|574
9N78|1|L1|C|575
9N78|1|L1|G|576
9N78|1|L1|G|577
9N78|1|L1|U|578
9N78|1|L1|A|579
9N78|1|L1|A|580
9N78|1|L1|U|581
9N78|1|L1|U|582
9N78|1|L1|C|583
9N78|1|L1|C|584
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain NA
- U3 small nucleolar RNA-associated protein MPP10
- Chain NB
- Something about silencing protein 10
- Chain SI
- Ribosome biogenesis protein BMS1
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain SR
- 40S ribosomal protein S23-A
- Chain ST
- Nucleolar complex protein 14
- Chain SY
- U3 small nucleolar RNA-associated protein 11
Coloring options: