IL_9NKL_039

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

9NKL|1|R1|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|C|1043
9NKL|1|R1|C|1044
9NKL|1|R1|C|1045
9NKL|1|R1|A|1046
9NKL|1|R1|G|1047
9NKL|1|R1|A|1048
9NKL|1|R1|C|1049
9NKL|1|R1|A|1050
9NKL|1|R1|G|1051
9NKL|1|R1|C|1052
9NKL|1|R1|C|1053
*
9NKL|1|R1|G|1106
9NKL|1|R1|G|1107
9NKL|1|R1|U|1108
9NKL|1|R1|C|1109
9NKL|1|R1|G|1110
9NKL|1|R1|A|1111
9NKL|1|R1|G|1112

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 36

50S ribosomal protein L36

Chain 6

Large ribosomal subunit protein uL6