IL_9NKL_082

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AACAUUGA*UUGAUGUU

Length

16 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|A|2094
9NKL|1|R1|A|2095
9NKL|1|R1|C|2096
9NKL|1|R1|A|2097
9NKL|1|R1|U|2098
9NKL|1|R1|U|2099
9NKL|1|R1|G|2100
9NKL|1|R1|A|2101
*
9NKL|1|R1|U|2188
9NKL|1|R1|U|2189
9NKL|1|R1|G|2190
9NKL|1|R1|A|2191
9NKL|1|R1|U|2192
9NKL|1|R1|G|2193
9NKL|1|R1|U|2194
9NKL|1|R1|U|2195

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 9

Large ribosomal subunit protein bL9