IL_9NKL_085

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAUAGGUGGGAG*CGACC

Length

18 nucleotides

Bulged bases

9NKL|1|R1|U|2118, 9NKL|1|R1|G|2120, 9NKL|1|R1|A|2126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|G|2115
9NKL|1|R1|G|2116
9NKL|1|R1|A|2117
9NKL|1|R1|U|2118
9NKL|1|R1|A|2119
9NKL|1|R1|G|2120
9NKL|1|R1|G|2121
9NKL|1|R1|U|2122
9NKL|1|R1|G|2123
9NKL|1|R1|G|2124
9NKL|1|R1|G|2125
9NKL|1|R1|A|2126
9NKL|1|R1|G|2127
*
9NKL|1|R1|C|2161
9NKL|1|R1|G|2162
9NKL|1|R1|A|2163
9NKL|1|R1|C|2164
9NKL|1|R1|C|2165

Current chains

Chain R1

23S ribosomal RNA

Nearby chains