IL_9NKL_161

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAGCGG*CCGGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R3|C|1128
9NKL|1|R3|C|1129
9NKL|1|R3|A|1130
9NKL|1|R3|G|1131
9NKL|1|R3|C|1132
9NKL|1|R3|G|1133
9NKL|1|R3|G|1134
*
9NKL|1|R3|C|1140
9NKL|1|R3|C|1141
9NKL|1|R3|G|1142
9NKL|1|R3|G|1143
9NKL|1|R3|G|1144

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain si

Small ribosomal subunit protein uS9