IL_9NL5_011

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCUGAAUCAGUGUG*CAUGCUGUGAGC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R1|G|273
9NL5|1|R1|C|274
9NL5|1|R1|C|275
9NL5|1|R1|U|276
9NL5|1|R1|G|277
9NL5|1|R1|A|278
9NL5|1|R1|A|279
9NL5|1|R1|U|280
9NL5|1|R1|C|281
9NL5|1|R1|A|282
9NL5|1|R1|G|283
9NL5|1|R1|U|284
9NL5|1|R1|G|285
9NL5|1|R1|U|286
9NL5|1|R1|G|287
*
9NL5|1|R1|C|353
9NL5|1|R1|A|354
9NL5|1|R1|U|355
9NL5|1|R1|G|356
9NL5|1|R1|C|357
9NL5|1|R1|U|358
9NL5|1|R1|G|359
9NL5|1|R1|U|360
9NL5|1|R1|G|361
9NL5|1|R1|A|362
9NL5|1|R1|G|363
9NL5|1|R1|C|364

Current chains

Chain R1

23S ribosomal RNA

Nearby chains