IL_9NL5_041

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUUGGC*GCCAUCA

Length

14 nucleotides

Bulged bases

9NL5|1|R1|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R1|U|1058
9NL5|1|R1|G|1059
9NL5|1|R1|U|1060
9NL5|1|R1|U|1061
9NL5|1|R1|G|1062
9NL5|1|R1|G|1063
9NL5|1|R1|C|1064
*
9NL5|1|R1|G|1074
9NL5|1|R1|C|1075
9NL5|1|R1|C|1076
9NL5|1|R1|A|1077
9NL5|1|R1|U|1078
9NL5|1|R1|C|1079
9NL5|1|R1|A|1080

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L16