IL_9NL5_127

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAAC*GUGC

Length

9 nucleotides

Bulged bases

9NL5|1|R3|A|130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R3|G|128
9NL5|1|R3|A|129
9NL5|1|R3|A|130
9NL5|1|R3|A|131
9NL5|1|R3|C|132
*
9NL5|1|R3|G|230
9NL5|1|R3|U|231
9NL5|1|R3|G|232
9NL5|1|R3|C|233

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16

Chain sq

Small ribosomal subunit protein uS17

Chain st

30S ribosomal protein S20