IL_9NL6_066
3D structure
- PDB id
- 9NL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9NL6|1|R1|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NL6_066 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.0995
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9NL6|1|R1|A|1669
9NL6|1|R1|C|1670
9NL6|1|R1|U|1671
9NL6|1|R1|A|1672
9NL6|1|R1|G|1673
9NL6|1|R1|G|1674
*
9NL6|1|R1|C|1990
9NL6|1|R1|U|1991
9NL6|1|R1|G|1992
9NL6|1|R1|U|1993
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L14
- Chain 3
- 50S ribosomal protein L3
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