IL_9NL6_135

3D structure

PDB id

9NL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAGAAG*UUGUAAAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL6|1|R3|U|409
9NL6|1|R3|G|410
9NL6|1|R3|A|411
9NL6|1|R3|A|412
9NL6|1|R3|G|413
9NL6|1|R3|A|414
9NL6|1|R3|A|415
9NL6|1|R3|G|416
*
9NL6|1|R3|U|426
9NL6|1|R3|U|427
9NL6|1|R3|G|428
9NL6|1|R3|U|429
9NL6|1|R3|A|430
9NL6|1|R3|A|431
9NL6|1|R3|A|432
9NL6|1|R3|G|433

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sd

30S ribosomal protein S4