IL_9NL6_138

3D structure

PDB id

9NL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGGGAG*CUCAUUGAC

Length

17 nucleotides

Bulged bases

9NL6|1|R3|U|479

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL6|1|R3|G|450
9NL6|1|R3|A|451
9NL6|1|R3|A|452
9NL6|1|R3|G|453
9NL6|1|R3|G|454
9NL6|1|R3|G|455
9NL6|1|R3|A|456
9NL6|1|R3|G|457
*
9NL6|1|R3|C|475
9NL6|1|R3|U|476
9NL6|1|R3|C|477
9NL6|1|R3|A|478
9NL6|1|R3|U|479
9NL6|1|R3|U|480
9NL6|1|R3|G|481
9NL6|1|R3|A|482
9NL6|1|R3|C|483

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16