IL_9NL7_088

3D structure

PDB id

9NL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUUGAAGUGUGG*CUGCAUGGAG

Length

23 nucleotides

Bulged bases

9NL7|1|R1|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL7|1|R1|C|2129
9NL7|1|R1|U|2130
9NL7|1|R1|U|2131
9NL7|1|R1|U|2132
9NL7|1|R1|G|2133
9NL7|1|R1|A|2134
9NL7|1|R1|A|2135
9NL7|1|R1|G|2136
9NL7|1|R1|U|2137
9NL7|1|R1|G|2138
9NL7|1|R1|U|2139
9NL7|1|R1|G|2140
9NL7|1|R1|G|2141
*
9NL7|1|R1|C|2150
9NL7|1|R1|U|2151
9NL7|1|R1|G|2152
9NL7|1|R1|C|2153
9NL7|1|R1|A|2154
9NL7|1|R1|U|2155
9NL7|1|R1|G|2156
9NL7|1|R1|G|2157
9NL7|1|R1|A|2158
9NL7|1|R1|G|2159

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL1