IL_9NLB_040

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

9NLB|1|R1|C|1045, 9NLB|1|R1|A|1046, 9NLB|1|R1|A|1111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R1|C|1043
9NLB|1|R1|C|1044
9NLB|1|R1|C|1045
9NLB|1|R1|A|1046
9NLB|1|R1|G|1047
9NLB|1|R1|A|1048
9NLB|1|R1|C|1049
9NLB|1|R1|A|1050
9NLB|1|R1|G|1051
9NLB|1|R1|C|1052
9NLB|1|R1|C|1053
*
9NLB|1|R1|G|1106
9NLB|1|R1|G|1107
9NLB|1|R1|U|1108
9NLB|1|R1|C|1109
9NLB|1|R1|G|1110
9NLB|1|R1|A|1111
9NLB|1|R1|G|1112

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 6

Large ribosomal subunit protein uL6